Illumina whole genome shotgun sequencing of genomic DNA paired-end li... - SRA

SRX364530: Illumina whole genome shotgun sequencing of genomic DNA paired-end library 'Pond-278558' containing sample 'Staphylococcus aureus M0987'
2 ILLUMINA (Illumina HiSeq 2000) runs: 4.8M spots, 967.1M bases, 453.1Mb downloads

UUID: f0a04dae-8a4d-4b0c-b98e-4c14fa012d48

Design: Illumina sequencing of Staphylococcus aureus M0987 via random selection

Submitted by: Broad Institute (BI)

Study: MRSA Surveillance II

PRJNA217099 • SRP031376 • All experiments • All runs

Sample: Generic sample from Staphylococcus aureus M0987

SAMN02334623 • SRS490947 • All experiments • All runs

Organism: Staphylococcus aureus M0987

Library:

Name: Pond-278558

Instrument: Illumina HiSeq 2000

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: PAIRED

Spot descriptor:

1 forward102 reverse

Experiment attributes: (show all 13 attributes...) (hide...)

analysis_type: AssemblyWithReference

data_type: WGS

gssr_id: 396130.0

library_type: WholeGenomeShotgun

lsid: broadinstitute.org:bsp.prod.sample:4UWKA

material_type: DNA:DNA Somatic

product_order: PDO-1932

product_part_number: P-WG-0004

project: G46162

research_project: RP-433

root_sample_id: SM-4C5EN

sample_id: SM-4UWKA

work_request: 37965

Pipeline: show...hide...

Name	Step	Program	Version	Notes
base caller	2013-10-02 03:58:37.0	GAPipeline	RTA1.17.21.3	Sequencer Application 2.1.35.0

Runs: 2 runs, 4.8M spots, 967.1M bases, 453.1Mb

Run	# of Spots	# of Bases	Size	Published
SRR1012115	2,390,596	482.9M	226.1Mb	2013-10-16
SRR1012116	2,397,185	484.2M	227Mb	2013-10-16

ID:: 521348

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